Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MKAYDI--EIVNDAAHAGEANHGWCFGLPPGIR---PEQWPLDPDTGYPLMHGFTLLLPEDYRV------HGPEIVALSFFSLAPDQNDGGPTSVDGIREMLIDPPAQPPAEAELRPFWEAGRNSHPRLHRMEDILGG-AYALILLDAAEFSGAPCQPRALPAGNPLLAQTEPPQWLEAGSAASFVP--DWAEDDYYLLRALGGRPA---AGHQQRYPLRWTA--RAQDPNAGVVPSEYG---DGGYQLPHYWLDGKIERDNYREHP----------------------------------WVEGHLPNHI--GGTMRPVQGVPEMS-----PFYVEFE-----EYLGGYNFGGGNAQLDFRDMRFDWACG-------------- |
| 4L9B Chain:A ((2-393)) | VLKGINFPENEASILDLAMQNRSGVLDGMTIDILNTTSNQLALFHGTAVLQGYGIEITGAPDVLVDTTGQSNETMLLCLTIDLNQVNVPSGTAVDYKQIRLEFLD------VPTLLKQYW--------RDHSLHDLIDPRRVISMPLYWITFGQTGTTPLYEQIKSNYIDNSGNPAYGIAARCENFNHFINKVAVQSIPINGVANRPVSSTASQLTNYKVWRNPYLCSQDPRDKFAPDNLVIEEDGIYRI---DISGSINIANYTFPARVGGRYFQIVCARNSSANNLAEFGAEQHLPPSGVWTRRVLVGEYTAGMTEQAFSSVATISLFKGDNFFLQFETGTNTSRDSAYNNGYGTSGTHLRNFSYTLERVGDLNGTAYYDNGTF |
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General information:
TITO was launched using:
| RESULT:
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Template: 4L9B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -80444 for 2003 contacts (-40.2/contact) +
2D Compatibility (PS) -30078 + (NN) -3083 + (LL) -328
1D Compatibility (HY) -13200 + (ID) 2800
Total energy: -129933.0 ( -64.87 by residue)
QMean score : 0.109
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