Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPAETPPLRPDADPPQCALPEARPDRDASTKLRAAVLGANDGLVSNLCLVMGVAGASMAHSSIVLTGMAGLVSGACSMALGEWLSVTNAREMASKRIAEEERLLRL-CPNTETQELIDIFTAKGLSEVSARRVALQLMNDGRGALDTLSREALGIDPTELGGNPWNAAGTSFLLFSLGALVPVAPFLFLDGAAALVASLLSSLLALLFSGAVTARFTGRPLAFSALRQVLVGTLAAAFTYGLGTALGVGLG |
3SK7 Chain:A ((142-176)) | -----------------------------------------------------------------------------------------------------WVITNNNTSRKQQMVEQVMVRMGFPSDIIEKVTHS------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SK7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -6886 for 157 contacts (-43.9/contact) +
2D Compatibility (PS) -3403 + (NN) 1959 + (LL) 13388
1D Compatibility (HY) -800 + (ID) 150
Total energy: 4108.0 ( 26.17 by residue)
QMean score : 0.503
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