Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKNVFVFSRLAPEHLERLQCQFNVRVLEPKQGDIDAQYAAALPDTHGM-IGVGRPLGARQLEQAKQLEVISSVSVGYDNYDLDYLNRRGIALTNTPDVLTETTADLGFALLISAARRVAELDAWVKAGNWKRTVDAPQF-GTDVHGKKLGILGLGRIGAAIARRGRFGFGMQVLYHGNNRKPELEQELGARFLGFDELLGEADFVCVVVPLGAQTRQLIGARELGLMKPSAILVNVARGQVVDEAALVAALREKRILGAGLDVYEKEPLAESPLFALDNVVTLPHIGSATHETRRAMAERALQNFEAALRGERPLDLVNPQVWRRG |
3DDN Chain:A ((6-313)) | ----VLIADKLAPSTVAALGDQVEVRWVDGPDRD---KLLAAVPEADALLVRSATTVDAEVLAAAPKLKIVARAGVGLDNVDVDAATARGVLVVNAPTSNIHSAAEHALALLLAASRQIPAADASLREHTWKRS----SFSGTEIFGKTVGVVGLGRIGQLVAQR-IAAFGAYVVAYDPYVSPARAAQLGIELLSLDDLLARADFISVHLPKTPETAGLIDKEALAKTKPGVIIVNAARGGLVDEAALADAITGGHVRAAGLDVFATEPCTDSPLFELAQVVVTPHLGASTAEAQDRAGTDVAESVRLALAGEFVPDAVN------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DDN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -206169 for 2551 contacts (-80.8/contact) +
2D Compatibility (PS) -33509 + (NN) -16362 + (LL) 832
1D Compatibility (HY) -19600 + (ID) 5550
Total energy: -280358.0 ( -109.90 by residue)
QMean score : 0.568
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