Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------------------MNLSLYLLTVLIWGTTWIAIKLQM-----GPVAITLSIAYRFALAALVLFAVLLLGRRLQRLDARGQRLCMAQGVCLFCLNFICFYTASQWIPSGLV----AVVFSTATLWNALNARLWFGQRIA---SNVMAGGGLGLLGLG-LLFWPELVGHQATPETFYGLGLALLGTLCFSTGNMLSSLQQKAGIRPLTGNAWSMLYG---TLILLALCLFQGVPLSFDWSARYVGSLLYLAIPGSVIGFTA---------YLTLVGRMGPDRAAYCTVLFPVVALNISAFAEGYRWTAPALAGLVLVMLGNVLVFRKPKAPALAGPARST---- |
| 3B9W Chain:A ((8-369)) | INEARLVAQYNYSINILAMLLVGFGFLMVFVRRYGFSATTGTYLVVATGLPLYILLRANGIFGHALTPHSVDAVIYAEFAVATGLIAMGAVLGRLRVFQYALLALFIVPVYLLNEWLVLDNASGLTEGFQDSAGSIAIHAFGAYFGLGVSIALTTAAQRAQPIESDATSDRFSMLGSMVLWLFWPSFATAIVPFEQMPQTIVNTLLALCGATLATYFLSALFHKGKASIVDMANAALAGGVAIGSVCNIVGPVGAFVIGLLGGAISVVGFVFIQPMLESKAKTIDTCGVHNLHGLPGLLGGFSAILIVPGIAVAQLTGIGITLALALIGGVIAGALIKLTGTTKQAYEDSHEFIHLAGPEDE |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3B9W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -271010 for 2545 contacts (-106.5/contact) +
2D Compatibility (PS) -30808 + (NN) -8827 + (LL) 0
1D Compatibility (HY) -4400 + (ID) 1800
Total energy: -316845.0 ( -124.50 by residue)
QMean score : 0.210
|
|
|