Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSYSKIPAGKDLPNDIYVAIEIPANHAPIKYEIDKDTDCLFVDRFMATPMFYPANYGFIPNTLADDGDPLDVLVVTPYPVAPGSVIRARPVGVLHMTDEAGGDAKLIAVPHDKLSVLYKDVKEYTDLPALLLEQIKHFFENYKDLEKGKWVKVEGWGNADAARAEITKAVAAFQK
2AU6 Chain:A ((1-171))
-SLLNVPAGKDLPEDIYVVIEIPANADPIKYEIDKESGALFVDRFMSTAMFYPCNYGYINHTLSLDGDPVDVLVPTPYPLQPGSVTRCRPVGVLKMTDEAGEDAKLVAVPHSKLSKEYDHIKDVNDLPELLKAQIAHFFEHYKDLEKGKWVKVEGWENAEAAKAEI---VASFER
General information:
TITO was launched using:
RESULT:
Template:
2AU6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -94019 for 1385 contacts (-67.9/contact) +
2D Compatibility (PS) -19265 + (NN) -13000 + (LL) 468
1D Compatibility (HY) -20000 + (ID) 6100
Total energy: -151916.0 ( -109.69 by residue)
QMean score : 0.588
(partial model without unconserved sides chains):
PDB file :
Tito_2AU6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2AU6-query.scw
PDB file :
Tito_Scwrl_2AU6.pdb
: