Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MITACPRPCAWRSYALGLGLLPLAAQAEFLADSSAHLDLRNFYQLRDYRQHDAPQSQAGNWSQGFVLRLQSGFTGGPLGFGLDATGLLGVKLDSGRGRSNDGTLPFGANSKEPVDDYSHLGLTAKLRYSQTQLQVGILMPQLPVAFRDDVRLLPQTFDGALLTSSEIEGLTLTAGQLWKSRTRESAGSDDMYIMGRDKAHA----SDEFNLAGATYAFTPRLSASYYYGQLKDIYRQHYLGLLHTLPLGEGLSLRSDLRYFDSGEDG--------------------AAISGPVDNRNLNAMLTLRAGAHAFGIGVQKMIGNDAFPVLN----GYTTPYVANLMAYQTFTRPQEKSWQLRYDYDFAGLGLPGLNLMTRYVQGRDIDRGAGRADDSEWERNTDLSYVIQSGPLKSVALKWRNITYRSRYGADLDENRFIVNYTLKLW |
| 4FRX Chain:A ((7-436)) | --------------------------AGFIEDSKASLTLRNFYINTDNR------SKQEEWGQGFILNYQSGFTQGTVGFGVDALGLLGVRL--------GTVFPLESNG-EPVHDFASLGLTAKAKVSNTEFRYGTLQPKLPVVTYNDGRLLPVTFEGGQVTSTDLKDFTLVAGQLEHSKGRNSTDNRSLSIAGANGSSASSRDSNKFYYAGGDYKVNKDLTLQYYYGNLDDFYKQHFLGLIHNWQIGPGV-LKTDLRAFDSSSDGKNGSRSGRADGYVSSGYYGSGVTKGEVDNRAFSGLFTYTVSGHSIGAGYQILNGDSDFPFLNRGDGEGSTAYLITDVQIGKFQRAGERTWQVRYGYDFATVGVPGLTFNTIYLSGDKIK--TARGDQSEWERDISLAYVIPDGTFKGLGFTWKNASFRSG---DQDENRLIVSYTLPL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4FRX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -17091 for 2869 contacts (-6.0/contact) +
2D Compatibility (PS) -37146 + (NN) 2557 + (LL) 1992
1D Compatibility (HY) -34400 + (ID) 8600
Total energy: -92688.0 ( -32.31 by residue)
QMean score : 0.206
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