Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLTLFRDYPNGRYAMTFDVIIVGGSYAGISAGMQLARARRRVLVM-DTGLRRNRFARASHGFLGQDGRDPAAIADDARAQLLAYPSVEWLSEAAVAAKKEADGFVVKAANGERFTARRLILASGVADELPEIPGLAERWGRHVFHCPYCHGYELDGGPIGVLAASPLAIHHALMLPDWGATTFFLN--GVFEPDAEQMSRLDRR-GVTIEREAVVA-LGGARA-------DVTLASGRTITLAGLFTQPRTRMASPLAALLGCEFEDGPSGPFIRTDGMRETSVPGVFACGD---AALAAGNVAIAVGDGARTGGAAHHSLLFR |
| 3F8P Chain:A ((16-314)) | -----------------FDVIIVGLGPAAYGAALYSARYMLKTLVIGETPGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKY-EVPVLLDIVEKIEN---EFVVKTKRKGEFKADSVILGIGVKRRKLGVPGEQEFAGRGISYCSVCDAPLFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKAQPIYVETVKKKPNVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDFAKSNGIETD---TNGYIKVDEWMRTSVPGVFAAGDCTSAWLGFRQVITAVAQGAVAATSAYR----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3F8P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -202560 for 2394 contacts (-84.6/contact) +
2D Compatibility (PS) -29836 + (NN) -5147 + (LL) 1328
1D Compatibility (HY) -17600 + (ID) 3550
Total energy: -257365.0 ( -107.50 by residue)
QMean score : 0.443
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