Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTDNHIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGGRVRHELEVYHDGELLRYFNYSSVDARGYFILMPCESLRRLVLEK--IDGEATVEMLFETRIEAVQRDERHAIDQVRLNDGRVLRPRVVVGADGIASYVRRRLLDIDVERRPYPSPMLVGTFALAPCVAERNRLYVDSQGGLAYFYPIGFDRARLVVSFPREEARELM------ADTRGES----LRRRLQRFVGDESAEAIAAVTGTSRFKGIPIGYLNLDRYWADNVAMLGDAIHNVHPITGQGMNLAIEDASALADALDLALRDACALEDALAGYQAERFPVN---QAIVSYGHALATSLEDRQRFAGVFDTALQGSSRTPEALGGERSYQPVRSPAPLG |
| 3ALL Chain:A ((16-372)) | ---------VAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDV----------LQGSHTPPTYETWMHNKSVSKETFNGLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAAD---PVGRLTLQTGEVLEADLIVGADGVGSKVRD---SIGFKQDRWVSKDGLIRLIVPRMKKELGHGEWDNTIDMWNFWP----RVQRILYSPCNENELYLGLMAPAADPRGSSVPIDLEVWVEMFPFLEPCLIEAAKLKTARYDKAET--TKLDSWTRGKVALVGDAAHAMCPALAQGAGCAMVNAFSLSQDLE----EGSSVEDALVAWETRIRPITDRCQAL-SGDYAANRSLS-------------KGNMFTPAALEAAR-YDPLR------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ALL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -98006 for 2972 contacts (-33.0/contact) +
2D Compatibility (PS) -35851 + (NN) -4242 + (LL) 3368
1D Compatibility (HY) -12800 + (ID) 4800
Total energy: -152331.0 ( -51.26 by residue)
QMean score : 0.320
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