Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSVEAAKNARELLLKEYRAVLSTHSKKWPGFPFGSVVPYCLDAEGRPLILISRIAQHTHNLQADPRCSMLVGERGAEDIQAVGRLTLLAEARQLAEEEVAAAAERYYRYFPESADYHRVHDFDFWVLQPVQWRFIGGFGAIHWLAAERVPLA---NPFAGEAERGMVEHMNSDHAAAIAHYVELA-GLPAHAAAQLAGIDTEGFHLRIGQGLHWLPFPAACGNPGAVRQALVQLARAERWPTVEPEQG |
3DNH Chain:A ((24-254)) | --FEAVRVARDVLHTSRTAALATLDPV-SGYPYTTATNIGIEPDGTPFFFAAGLTLHARNMETDARISVTLAPFGKGDALTLPRLTLVGRADRIGPDEVPLAIARYIARYPKAKLYLSLPDTRLYRLRTEGVQING-----SNITPADLRTDLSGAEELMAAAESEATRLNAIKGEASRLA--VLAGAK-TGRWKITSIDPDGIDLASASDLARLWFAERVETLKQFEKALAQLLK------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DNH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -29243 for 1654 contacts (-17.7/contact) +
2D Compatibility (PS) -23107 + (NN) -5722 + (LL) 1832
1D Compatibility (HY) 6400 + (ID) 1400
Total energy: -51240.0 ( -30.98 by residue)
QMean score : 0.136
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