Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------MSRRLPFLLRCALFCGAGLLAATAQARMESLDDD----QLSDV---------VGQAFINLTTDAANGLNFTRINFGADIETQLNMKKLQLGQYNRSGELAGSADIAIDNFALGTVNDTTGAINPFLISNPYIEFAYDG-SKMVGIRIGFGEAKGYLSGDIKT---LTGNVPVDLY--GTGSQLGGSISCGLLALDCLAAK-------------------TAITLTGSSQYTAQAELVNSSGNPDPIRAAMIGLKNGTALDMH-------DSTIIGSLVNVLLPF----LTSNDCKLMGAQTCFNLAQYQSFPIGTVDPNNAQNFIDS---SKGFFISMQSQNVQWRDQQDPSKLVAALAGAFLNMSRNADGTAPIKVDFGQAFN--GIPRQDTCLGGLNKGC------------------------------------------------- |
| 4P42 Chain:A ((3-470)) | DTERAEWLNKTVKHMWPFICQFIEKLFRETIEPAVRGANTHLSTFSFTKVDVGQQPLRINGVKVYTENVDKRQIILDLQISFVGNCEIDLEIKRYFCRAGVKSIQIHGTMRVILEPLIGDMPL--VGALSIFFLRKPLLEINWTGLTNLLDVPGLNGLSDTIILDIISNYLVLPNRITVPLVSEVQIAQLRFPVPKGVLRIHFIEAQDLQGKDTYLKGLVKGKSDPYGIIRVGNQIFQSRVIKENLSPKWNEVYEALVYEHPGQELEIELFDEDPDKDDFLGSLMIDLIEVEKERLLDEWFTLDEVPKGKLHLRLEWLTLMP-NASNLDKVLTDIGLSSALLILYLDSARNLPSSSNPNPVVQMSVGHKAQESKIRYKTNEPVWEENFTFFIHNPKRQDLEVEVRDEQHQCSLGNLKVPLSQLLTSEDMTVSQRFQLSNSGPNSTIKMKIALRVLHLE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4P42.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -63758 for 2155 contacts (-29.6/contact) +
2D Compatibility (PS) -35694 + (NN) -882 + (LL) 168
1D Compatibility (HY) -20800 + (ID) 2650
Total energy: -123616.0 ( -57.36 by residue)
QMean score : 0.061
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