Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSQSNTLTVQILDKEYCINCPDDERANLESAARYLDGKMREIRSSGKVIGADRVAVMAALNITHDLLHRKE--RLDQESSSTRERVREL--LDRVDRALANPADAGEA
3UFB Chain:A ((249-315))
---------------------------------------REVLQESSIFGGEAKSLPYLLVQMNLLLHGLEYPRIDPENS-LRFPLREMGDKDRVDVILTNPPFGGE-
General information:
TITO was launched using:
RESULT:
Template:
3UFB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 13279 for 283 contacts (46.9/contact) +
2D Compatibility (PS) -6476 + (NN) -2770 + (LL) 2608
1D Compatibility (HY) -3200 + (ID) 1200
Total energy: 2241.0 ( 7.92 by residue)
QMean score : 0.274
(partial model without unconserved sides chains):
PDB file :
Tito_3UFB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3UFB-query.scw
PDB file :
Tito_Scwrl_3UFB.pdb
: