Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------MLLGLSRSLWGYRGFVLGSVKREFQSRY-RGSLFGA-----LWTVLNP-------LSMIVVYTVIFSQV----MRARLPGVDDGLAYSVYLCAGLL--TWGLFAEITSR------------SQSMFIENANLLKKISFPRICLPVIVLLNAG---VNFAIILALFLGFLALSGRLPGAALLALVPLLAIQVLFAAGLGMILGVLNVFFRDVGQLFGICLQFWFWLTPIVYPIGI--LPEGIRSLIELNPMT-ALMRSYQQLFLHGQWPDWPSL-----------LPITLLAL--------------------LLCALGLRLFRQRVGEMVDEL-- |
| 3J6V Chain:E ((89-430)) | FFTKLTADELWKGALAETGAGARKGRGKRTKRKRRKDLNRGQIIGEGRRGFLWPGLNAPLMKSGAIQTITQRSKEEQEKVEADMVQQREEWDRKRKMKVKRERGWSGNSWGGISLGPPDPGPNGETYDDFDTRILEVRNVFNMTAKEGRKRSVRVLVAVGNGRGAAGFAIGKATERADAFRKAKNRAVHYLHYIERYEDHTIYH-DISLTFKRTHIKMKKQPRGYG--LRCHRAITTICRLIGIKDMYAKVSGSVNMLSLTRGLFQGLSRQETHQQLADKKSLHVVEFREECGPLPIVVASPQGALRKDPEPEDEVPDIKLDWDDVKAVQGMKRSVWSGLKRAAT |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3J6V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -193149 for 1664 contacts (-116.1/contact) +
2D Compatibility (PS) -25788 + (NN) 11488 + (LL) 404
1D Compatibility (HY) 2000 + (ID) 2300
Total energy: -207345.0 ( -124.61 by residue)
QMean score : -0.050
|
|
|