Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGKAKLSLAWQIVIGLALGIAVGAVLNHFSAEKAWWIANVLQPAGDIFIRLIKMIVVPIVISSLVVGIAGVGDAKKLGRIGLKTIIYFEIVTTVAIVVGLLLANLFQPGTGIDMSTLGTVDISQYQKTTQEVQHDHAFIATILNLIPSNVFAAIARGEMLPIIFFSVMFGLGLSSL--PNDLR-----EPLVKVFQGVSETMFKVTHMIMKYAPIGVFALIAVTVANFGFASLLPLAKLVILVYVAIVFFALVVLGLIARMFGFSIMRLIRIFKDDLVLAYSTASSETVLP---RIIEKMEAYGAPKAISSFVVPTGYSFNLDGSTLYQSIAAIFIAQLYGIDLSIGQQIMLVLTLMVTSKGIAGVPGVSFVVLLATLGSVGIPLE-------GLAFIAGVDRIMDMARTALNVIGNALAVLVISKWEGMYDAAKGQRYWDSLPHLRQAVGEAKGKQATLE |
| 4KY0 Chain:A ((16-427)) | ---------WKILWGLVLGAVFGLIAGHFGYAGA--VKTYIKPFGDLFVRLLKMLVMPIVLASLVVGAASISPAR-LGRVGVKIVVYYLATSAMAVFFGLIVGRLFNVGANVNLGS-GTGKAI--------------LVQTLLNIVPTNPFASLAKGEVLPVIFFAIILGIAITYLMNRNEERVRKSAETLLRVFDGLAEAMYLIVGGVMQYAPIGVFALIAYVMAEQGVRVVGPLAKVVGAVYTGLFLQIVITYFILLKVFGIDPIKFIRKAKDAMITAFVTRSSSGTLPVTMRVAE--EEMGVDKGIFSFTLPLGATINMDGTALYQGVTVLFVANAIGHPLTLGQQLVVVLTAVLASIGTAGVPGAGAIMLAMVLQSVGLDLTPGSPVALAYAMILGIDAILDMGRTMVNVTGDLAGTVIVAKTEKELDESK-------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KY0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -444212 for 3365 contacts (-132.0/contact) +
2D Compatibility (PS) -41004 + (NN) -22223 + (LL) 4424
1D Compatibility (HY) -46400 + (ID) 7850
Total energy: -557265.0 ( -165.61 by residue)
QMean score : 0.348
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