Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAELTTLARPYAKAAFEYAQAHQQLADWSAALGVLAAVSQDDTVRQLLKEPQLTSSAKAQSLIDVCGDKLNAPAQNFVRTVAENKRLELLPTIAEMYEQLKAEQEKSVEVEVTSAFTLSKEQQDKLAKALSARLSREVRLHASEDASLIGGVIIRAGDLVIDGSVRGKLAKLAEALKS
1ABV Chain:A ((3-105))
---FITVARPYAKAAFDFAVEHQSVERWQDMLAFAAEVTKNEQMAELLSGALAP-ETLAESFIAVCGEQLDENGQNLIRVMAENGRLNALPDVLEQFIHLRAVSEAT-----------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1ABV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50152 for 781 contacts (-64.2/contact) +
2D Compatibility (PS) -11123 + (NN) -5154 + (LL) 6428
1D Compatibility (HY) -8800 + (ID) 2000
Total energy: -70801.0 ( -90.65 by residue)
QMean score : 0.740
(partial model without unconserved sides chains):
PDB file :
Tito_1ABV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ABV-query.scw
PDB file :
Tito_Scwrl_1ABV.pdb
: