Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKSLPGVADLRLGANHPRMWTRRVQGTVVNVGVKVLPWIPTPAKRILSAGRSVIIDGNTLDPTLQLMLSTSRIFGVDGLAVDDDIVASRAHMRAICEAMPGP-QIH-VDVTDLSIPGPAG--EIPARHYRPSGG-GATPLLVFYHGGGWTLGDLDTHDALCRLTCRDADIQVLSIDYRLAPEHPAPAAVEDAYAAFVWAHEHASDEFGALPGRVAVGGDSAGGNLSAVVCQLARDKARYEGGPTPVLQWLLYPRTDFTAQTRSMGLFGNGFLLTKRDIDWFHTQYLRDSDVDPAD----PRLSPLLAESLSGLAPALIAVAGFDPLRDEGESYAKALRAAGTAVDLRYLGSLTHGFLNLFQLGGGSAAGTNELISALRAHLSRV |
| 1LZL Chain:A ((5-316)) | ----------------------------------------------------------PTLDPELAAALTMLPK---VDF--A-DLPNARATYDALIGAMLADLSFDGVSLRELSAPGLDGDPEVKIRFVTPDNTAGPVPVLLWIHGGGFAIGTAESSDPFCVEVARELGFAVANVEYRLAPETTFPGPVNDCYAALLYIHAHAE-ELGIDPSRIAVGGQSAGGGLAAGTVLKARD----EGVVPVAFQFLEIPELDDRLETVSMTNFVDTPLWHRPNAILSWKYYLGESYSGPEDPDVSIYAAPSRATDLTGLPPTYLSTMELDPLRDEGIEYALRLLQAGVSVELHSFPGTFHGSALVATAA-VSERGAAEALTAIRRGL--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1LZL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -166511 for 2749 contacts (-60.6/contact) +
2D Compatibility (PS) -32875 + (NN) -20046 + (LL) 4400
1D Compatibility (HY) -13200 + (ID) 5450
Total energy: -233682.0 ( -85.01 by residue)
QMean score : 0.486
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