Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGRIQRNKIKVEIKKLSHGKDLPLPCYATMQSAGMDLYAALGNSIVLNP-LERLLIPTGIVIVIPNGFEGQIRPRSGLAAKYGITVLNSPGTIDSDYRGEVKVCLINLSNQPYEIKRGDRIAQILIAPVFRVIWDDAERLCTEETERSAGGFGSSGR
3TQ5 Chain:A ((25-137))
------------------KQPISKLTRATPGSAGLDLCSTSH--TVLTPEMGPQALSTGIYGPLPPNTFGLILGRSSITMK-GLQVY--PGVIDNDYTGEIKIMAKAV-NNIVTVSQGNRIAQLILLPLIETD----NKV--Q--------------
General information:
TITO was launched using:
RESULT:
Template:
3TQ5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -90591 for 752 contacts (-120.5/contact) +
2D Compatibility (PS) -11702 + (NN) -1060 + (LL) 1700
1D Compatibility (HY) -6400 + (ID) 1850
Total energy: -109903.0 ( -146.15 by residue)
QMean score : 0.323
(partial model without unconserved sides chains):
PDB file :
Tito_3TQ5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TQ5-query.scw
PDB file :
Tito_Scwrl_3TQ5.pdb
: