Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNFKYLFVLMLAVIVFAAACGNSSSLDNQKNASNDSDSKSGGYKPKELTVQFVPSQNAGTLEAKAKPLEKLLSKEL-GIPVKVSVSTNYNTIVEAMKSKKVDVGFLPPTAYTLAHDQ-KAADLLLQAQRFGVKEDGSASKELVDSYKSEILVKKDSKIKSLKDLKGKKIALQDVTSTAGYTFPLAMLKNEAGINATKDMKIVNVKGHDQAVISLLNGDVDAAAVFNDARNTVKKDQPNVFKDTRILKLTQAIPNDTISVRPDMDKDFQEKLKKAFIDIAKSKEGHKIISEVYSHEGYTETKDSNFDIVREYEKLVKDMK |
| 3KSX Chain:A ((25-193)) | ------------------------------------------AAEPAQLRIGYQKAVSSLVLA----KQHRLLEQRFPRTKITWVEFPAGPQLLEALNVGSIDLGGAGDIPPLFAQAAGADLLYVGWVP--------------PTPKAETILVPSKSALRTVADLKGKRIAFQKGSSA-HNLL-LRVLAK-SGLSMRD-ITPLYL-SPANARAAFAAGQVDAWAIWDPWYSALT-------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KSX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -47761 for 1223 contacts (-39.1/contact) +
2D Compatibility (PS) -18088 + (NN) -4710 + (LL) 9164
1D Compatibility (HY) -8000 + (ID) 1600
Total energy: -70995.0 ( -58.05 by residue)
QMean score : 0.483
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