Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKHTGTIISISGFVLRIEFNESELPEIGFALEYHTHQGTYLAEVVQHTGINTVSAIAIGEVSGLARGTEVVNLGHPIEVPVGETVQGRMLNVYGKAIDGKPEPAAEVKWPIFRAQPLLRELDTNKEILYTGIKVIDLICPILKGGKTGLFGGAGVGKSVLMQELINNISML-GGNSVFTGVGERVREGIGLYKELEASGVL------PQTTVVLGQMNESPGVRMRVALTGLTIAEYLRDEEKKDVLLFIDNVFRFIQAGSEVSSLQGKIPITGGYQSTLSKEVGDFQDRIASTKNGSITSIQCVFLPADDIDDPSAVATFSHLDSTIVLERSIAALGIFPAVNPLQSFSRALNPTFVGERHYQLAVQVKFILQRYMELQEIINVLGMAELSDEDRKLVHRARKIRNFLSQPFYVSEKFTGTEGTFVEIEDLLGSIERILNGDYDERSERDFLFIGSYKDLK |
| 1E1Q Chain:D ((14-469)) | ----TGRIVAVIGAVVDVQFDEG-LPPILNALEVQGRETRLVLEVAQHLGESTVRTIAMDGTEGLVRGQKVLDSGAPIRIPVGPETLGRIMNVIGEPIDERGPIKTKQFAAIHAEAPEFVEMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVSRARKIQRFLSQPFQVAEVFTGHLGKLVPLKETIKGFQQILAGEYDHLPEQAFYMVGPIEE-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1E1Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -247849 for 3894 contacts (-63.6/contact) +
2D Compatibility (PS) -48270 + (NN) -13518 + (LL) 724
1D Compatibility (HY) -41600 + (ID) 11700
Total energy: -362213.0 ( -93.02 by residue)
QMean score : 0.491
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