Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLNEQQITRLLYRLQDPVLEASLEETEGVLEVQVLEETANIKIALADPAVETDHFVHNIEELLTQFGVNEINIELEYLPAAVIDRIFQARDNILSEASETKFLAIASGKGGVGKSTVSANLAIALAQQGKKVGLLDADIYGFSIPVLLGTTESPH---KEN--------GQIIPVETHGIQMISMDFFVEQGEPVIWRGPMLGKMIKMFLEEVRWGKLDYLLIDLPPGTGDVALDI-HTLIPKCNELIVTTPHYAAASVASRAGYMAAKN----NHKIIGVIENMSYLTLADGQVLKVFGQGGGEKVAADLETQLLIQLPIEQPEPNG--NGYVSALFNSSSTSGKAYKTLAEKIIPYLS |
| 1CP2 Chain:A ((1-247)) | ---------------------------------------------------------------------------------------------------MRQVAIY-GKGGIGKSTTTQNLTSGLHAMGKTIMVVGCDPKADSTRLLLGGLAQKSVLDTLREEGEDVELDSILKEGYGGIRCVESGGPEPGVG-CAGRGIITSINMLEQLGAYT-DDLDYVFYDVLGDVVCGGFAMPIREGKAQEIYIVASGEMMALYAANNISKGIQKYAKSGGVRLGGIICNSRKVANE----Y-----ELLDAFAKELGSQLIHFVPRSPMVTKAEINKQTVIEYDPTCEQAEEYRELARKVDAN-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1CP2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -108350 for 2006 contacts (-54.0/contact) +
2D Compatibility (PS) -24154 + (NN) -2903 + (LL) 9944
1D Compatibility (HY) -4400 + (ID) 2400
Total energy: -132263.0 ( -65.93 by residue)
QMean score : 0.395
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