Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTAVAAGALVVETDSFRLRLLDGLVASIGERGYRATTVSDIVRHARTSKRTFYDRFTSKEQCFLELLLADNETLGNSIRAAVD--PNADWHDQIRQAVEAYVTHIESRPAVTLSWIREFPSLGAAAY----PVQRRGMEQLTSLLIELSASPGFRRANLPPLNVPLAVILLGGLRELTALTVEDG---QPIRNIVEPAVDASIALLGPRS
3G1L Chain:A ((42-233))
------------GDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPTFYFYFPSKEAVLLTLLDRVVNQADMALQTLAENPADTDRENMWRTGINVFFETFGSHKAVTRAGQAARAT-SVEVAELWSTFMQKWIAYTAAVIDAERDRGAAPR-TL--PAHELATALNLMNERTLFASFAGEQPSVPEARVLDTLVHIWVTSIYG--
General information:
TITO was launched using:
RESULT:
Template:
3G1L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -95457 for 1304 contacts (-73.2/contact) +
2D Compatibility (PS) -19805 + (NN) -9609 + (LL) 1632
1D Compatibility (HY) -3200 + (ID) 1550
Total energy: -127989.0 ( -98.15 by residue)
QMean score : 0.626
(partial model without unconserved sides chains):
PDB file :
Tito_3G1L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3G1L-query.scw
PDB file :
Tito_Scwrl_3G1L.pdb
: