Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNHPDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI---GCGAAACRVDVSDEQQIIAMVDACVAAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMIAR-LQGRMAAPEEMAGIVVFLLSDDASMITGTTQIADGGTIAALW |
| 4J2H Chain:A ((7-256)) | --IFDLSGRRALVTGASRGIGQSIAVALAEAGAHVAVTARTVEGLAETRALIEKTGRRAVALAQDVRDVEACASVTRAAAEGLGGLDILVNNAGFENVRPSFDVDEALWDTIVSTNLKGAFFCAQAAGRIMADANGGAIVNLCSLTSYVGIPTAVPYGASKSGLLGVTRALATEWAAHNIRVNAIAPGYFRTAMTAGFYEDE------DWQSRMLEKIPQRRFGKESDIGGVAVFLCSDAAAYITGHCIPADGGYLAS-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4J2H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -161242 for 2147 contacts (-75.1/contact) +
2D Compatibility (PS) -26284 + (NN) -6297 + (LL) 504
1D Compatibility (HY) -13200 + (ID) 4200
Total energy: -210719.0 ( -98.15 by residue)
QMean score : 0.391
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