Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDRVAGQVNSRRGELLELAAAMFAERGLRATTVRDIADGAGILSGSLYHHFASKEEMVDELLRGFLDWLFARYRDIVD--STANPLERLQGLFMASFEAIEHHHAQVVIYQDEAQRLASQPRFSYIEDRNKQQRKMWVDVLNQGIEEGYFRPDLDVDLVYRFIRDTTWVSVR-WYRPGG-PLTAQQVGQQYLAIVLGGITKEGV
5EYR Chain:A ((26-218))
-------GDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPTFYFYFPSKEAVLLTLLDRVVNQADMALQTLAENPADTDRENMWRTGINVFFETFGSHKAVTRAGQAARATS-V-EVAELWSTFMQKWIAYTAAVIDAERDRGAAPRTLPAHELATALNLMNERTLFASFAGEQPSVPEARVLDTLVHIWVTSIYGE--
General information:
TITO was launched using:
RESULT:
Template:
5EYR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -105724 for 1352 contacts (-78.2/contact) +
2D Compatibility (PS) -20011 + (NN) -8014 + (LL) 800
1D Compatibility (HY) -5200 + (ID) 1550
Total energy: -139699.0 ( -103.33 by residue)
QMean score : 0.426
(partial model without unconserved sides chains):
PDB file :
Tito_5EYR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5EYR-query.scw
PDB file :
Tito_Scwrl_5EYR.pdb
: