Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGRSSRKDEILQAALACFSEHGVDATTIEMIRDRSGASIGSLYHHFGNKERIHGELYLAGIGQYAALLEAGFARARSAEETVRLLVTSYIDWVVANPDWARFILHSRGRVEAGELGERLRADNQAHFARIHAALAGYRAEGLFREMPDDCFASVVIGPAHDLARQWLAGRTRVALADCRELLAQVAWDSVRAA
3HIM Chain:A ((14-200))
--TSKAAARIRAAAIEVFAAKGYGATTTREIAASLDMSPGAVYPHYKTKESLLYAISLEGHHSVLAAITAADFPDIAAPDRLMSTVTAYVTWHADNRASARVGQYELRSLSP-EHFAIIADIRRSTTKVFTRIIEAGATAGDFHPFDIEAAALAITSLGID-VSRWFPSHTYSDPRIIAARYVELALRMVGCA
General information:
TITO was launched using:
RESULT:
Template:
3HIM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -113947 for 1453 contacts (-78.4/contact) +
2D Compatibility (PS) -20428 + (NN) -6819 + (LL) 40
1D Compatibility (HY) -3200 + (ID) 1850
Total energy: -146204.0 ( -100.62 by residue)
QMean score : 0.492
(partial model without unconserved sides chains):
PDB file :
Tito_3HIM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HIM-query.scw
PDB file :
Tito_Scwrl_3HIM.pdb
: