Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
PRCPNLDEPTVGIDPELRKTIWEELDDLKANGKCILVTTHVMDEAEK-CDRLAMIRNGEIIAVGTPQELSSKTSSGKLEDAFLEFGGKH
2OLJ Chain:A ((178-251))
PKIMLFDEPTSALDPEMVGEVLSVMKQLANEGMTMVVVTHEMGFAREVGDRVLFMDGGYIIEEGKPEDLFDRPQ---------------
General information:
TITO was launched using:
RESULT:
Template:
2OLJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -14047 for 422 contacts (-33.3/contact) +
2D Compatibility (PS) -8226 + (NN) -5260 + (LL) 520
1D Compatibility (HY) -5200 + (ID) 1150
Total energy: -33363.0 ( -79.06 by residue)
QMean score : 0.510
(partial model without unconserved sides chains):
PDB file :
Tito_2OLJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OLJ-query.scw
PDB file :
Tito_Scwrl_2OLJ.pdb
: