Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGKNEARRSALAPDHGTVVCDPLRRLNRMHATPEESIRIVAAQKKKAQDEYGAASITILEGLEAVRKRPGMYIGSTG-ERGLHHLIWEVVDNAVDEAMAGYA--TTVNVVLLEDGG--VEVADDGRGIPVATHAS-GIPTVDVVMTQLHAGGKFDSDAYAISG-------GLHGVGVSVVNALSTRLEVEIKRDGYEWSQVY-----EKSEPLGLKQGAPTKKTGSTVRFW-------ADPAVFETTEYDFETVARRLQEMAFLNKGLTINLTDERVTQDEVVDEVVSDVAEAPKSASERAAESTAPHKVKSRTFHYPGGLVDFVKHINRTKNAIHSSIVDFSGKGTGHEVEIAMQWNAGYSESVHTFANTINTHEGGTHEEGFRSALTSVVNKYAKDRKLLKDKDPNLTGDDIREGLAAVISVKVSEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPTDAKVVVNKAVSSAQARIAARKARELVRRKSATDIGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAILPLRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDIGKLRYHKIVLMADADVDGQHISTLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAGLKAGKKINKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVDARRSFITRNAKDVRFLDV |
1EI1 Chain:A ((1-219)) | --------------------------------------------SNSSDSSSIK---VLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAG--HCKEIIVTIHA--DNSVSVQDDGRGIPTGIHPEEGVSAAEVIMTVLHAGGKFDD-------NSYKVSGGLHGVGVSVVNALSQKLELVIQRE--GKIHRQIYEHGVPQAPLAVTGET--EKTGTMVRFWPSLETFT------NVTEFEYEILAKRLRELSFLDSGVSIRLRD-KRD--GKEDHFHYEG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1EI1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -88997 for 1402 contacts (-63.5/contact) +
2D Compatibility (PS) -21237 + (NN) -8554 + (LL) 32992
1D Compatibility (HY) -15600 + (ID) 4750
Total energy: -106146.0 ( -75.71 by residue)
QMean score : 0.416
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