Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTPVTTFPLVDAILAGRDRNLDGVILIAAQHLLQTTHAMLRSLFRVGLDPRNVAVIGKCYSTHPGVVDA-MRADGIYVDDCSDAYAPHESFDTQYTRHVERFFAESWARLTAGRTARVVLLDDGGSLLAVAGAMLDASADVIGIEQTSAGYAKIVGCALGFPVINIARSSAKLLYESPIIAARVTQTAFERTAGIDSSAAILITGAGAIGTALADVLRPLHDRVDVYDTRSGCMTPIDLPNAIGGYDVIIGATGATSVPASMHELLRPGVLLMSASSSDREFDAVALRRRTTPNPDCHADLRVADGSVDATLLNSGFPVNFDGSPMCGDASMALTMALLAAAVLYASVAVADEMSSDHPHLGLIDQGDIVASFLNIDVPLQALSRLPLLSIDGYRRLQV--RSGYTLFRQGERADHFFVIESGELEALVDGK-VILRLGAGDHFGEACLLGGMRRIATVRACEP-SVLWELDGKAFGDALHGDAAMREIAYGVARTRLMHAGASESLMV |
1O7F Chain:A ((13-445)) | -------AEWIACLDKRPLERSSEDVDIIFTRLKGVK-AFEKFHPNLLRQICLCGYYENLEKGITLFRQGDIGTNWYAVLAG-------SLDVKVSETSSHQDAVTICTLGIGTAFGESILDNTPR-----HATIVTRESSELLRIEQEDFKALWEKYRQYMAGLLAPPYGVMETVPSEKILRAGKILRIAILSRAPHM--------------------IRDRKYHLKTYRQCCVGTELVDWMIQQTSCVH--SRTQAVGMWQVLLEDGVLNHVDQERHFQDKYLFYRFLDDEREDAPLPTEEEKKECDEEL-----------------------QDTMLLLSQMGPDAHMRMILRKPPGQRTVDDLEIIYDELLHIKALSHLSTTVKRELAGVLIFESHAKGGTVLFNQGEEGTSWYIILKGSVNVVIYGKGVVCTLHEGDDFGKLALVNDAPRAASIVLREDNCHFLRVDKEDFNRILRDVEAN----------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1O7F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -165081 for 3288 contacts (-50.2/contact) +
2D Compatibility (PS) -43541 + (NN) -5757 + (LL) 6212
1D Compatibility (HY) -5200 + (ID) 3200
Total energy: -216567.0 ( -65.87 by residue)
QMean score : 0.263
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