Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHSLQAKILDPRLGSDFPLPQYATPGSAGLDLRAMLKEDSVLGPGQTLLIPTGLSIYIADPGLAALVLPRSGLGHKHGIVLGNLVGLIDSDYQGELMVSCWNRGESPFTIAVGERIAQLVLVPVVQ-AHFELVEAFDESQRGAGGFGHSGSH
3P48 Chain:A ((15-133))
-------------SASATVPTKGSATAAGYDIYAS--QDITIPAMGQGMVSTDISFTVPV-GTYGRIAPRSGLAVKNGIQT--GAGVVDRDYTGEVKVVLFNHSQRDFAIKKGDRVAQLILEKIVDDAQIVVVDSLE---------------
General information:
TITO was launched using:
RESULT:
Template:
3P48.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -88566 for 792 contacts (-111.8/contact) +
2D Compatibility (PS) -12745 + (NN) -6119 + (LL) 760
1D Compatibility (HY) -6000 + (ID) 1800
Total energy: -114470.0 ( -144.53 by residue)
QMean score : 0.363
(partial model without unconserved sides chains):
PDB file :
Tito_3P48.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3P48-query.scw
PDB file :
Tito_Scwrl_3P48.pdb
: