Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLSNSQGQSPPVPFPAPAPPPQPPTPALPHPPAQPPPPPPQQFPQFHVKSGLQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC---PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQT---PLHTSRVLKEDKERWEDVKEEMTSALATMRVDY-EQIK------IKKIEDASNPLLLKRRKKARALEAAALAH |
| 3Q5I Chain:A ((23-383)) | -----------------------------------------------PGMYVRKKEGKIGESYFK-VRKLGS--YGEVLLCKEKNGHSEKAIKVIKK-KFHEEIYNEISLLKSLD-HPNIIKLFDVFEDK----KYFYLVTEFYEGGELFEQIINRH--KFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQN----DQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYANNINKSDQKTL-CGALSNMRK-FEGSQKLAQAAILFIGSKLTTLEERKELTDIFKKLDKNGDGQLDKKELIEGYNV----- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3Q5I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -153559 for 2538 contacts (-60.5/contact) +
2D Compatibility (PS) -35139 + (NN) -17815 + (LL) 912
1D Compatibility (HY) -22400 + (ID) 5300
Total energy: -233301.0 ( -91.92 by residue)
QMean score : 0.554
|
|
|