Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTPVTTFPLVDAILAGRDRNLDGVILIAA-QHLLQTTHAMLRSLFRVGLDPRNVAVIGKCYSTHPGVVDAMRADGIYVDDCSDAYAPHESFDTQYTRHVERFFAESWARLTAGRT-ARVVLLDDGGSLLAVAGAMLDASADVIGIEQTSAGYAKIVGC-----ALGFPV-INIARSSAKLLYESPIIAARVTQTA--FERTAGIDSSAAILITGAGAIGTALADVLRPLHD----RVDVYDT---RSGCMTPIDLPNAIGGYDVIIGATGATSVPASMHELLRPG------VLLMSASSSDREFDAVALRRR---TTPNP-----DCHADLRVADGSVDATLLNSGFPVNFDGSPMCGDASMALTMALLAAAVLYASVAVADEMSSDHPHLGLIDQGDIVASFLNIDVPLQALSRLPLLSID-GYRRL-QVRSGYTLFRQGERADHFFVIESGELEALVDGKVILRLGAGDHFGEACLLGGMRRIATVRACEPSVLWELDGKAFGDALHGDAAMREIAYGVARTRLMHAGASESLMV---- |
| 4RU0 Chain:A ((30-444)) | GPDQQFFPL--ATYRVGAYASSGVQVWAGMIDYLNYINQVEGGINGVK---------------------------LVWQECE----------TEWT---AEKGIECYERFKNGLDGAPVAVYQPNG---APAAYALSERAEVDKIPLITLGYGRTEATDGTVFPYNFPVMLT-------FYSEASTLVNYIAQREGGFDRLKGKKIATLYHDSAYGRETLGPLKLLAEKYGFENIQIPVADPGNEQSAQWRQIRQQNP----DWVFLRTWGVSTPVAVKTAARFGFPVDHIIGDIWASSSEDVLPAGAAAKGYLALTPYPAGSDFEIHKRLKQY-------ILDTGKS---DLKDLKNFGSVYYNSGLVNAAVAVEAIRTAQGKFGKRPLNG--EEGRWGLEHLNID-----DARLK----DMGYLGLMQN---------------------------------LKLSCRDHEG-----GGAARVQQW-----------DGANWTLISEWIAADRALLRPLIDEKAAAFAKEKRLVPRTCN |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4RU0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -189738 for 3227 contacts (-58.8/contact) +
2D Compatibility (PS) -39743 + (NN) -4063 + (LL) 8596
1D Compatibility (HY) -8400 + (ID) 4750
Total energy: -238098.0 ( -73.78 by residue)
QMean score : 0.315
|
|
|