Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MINEEVVKENLKEVIERKSGKDVIALGIISSIVIKGKDIGFVLEISGDTQANEELRKNCEKAVKAIPGVGKVTVVAAGRKQAGQQRAKLHIEGVKNIIVVASGKGGVGKSTVALNLAFSLAKLKHKVALVDADIYGPSIPKMLGAEKLKP----K------IQGSRII-PIEKYGLHTISIGYFIDKDCAAMWRGPMITKALYNLLMGTKWSDIEYLVVDTPPGTGDVHLSLMENFNLTGGIIVSTPQELALVDARKIYNMFTKLS--------VPIFGIVENMSYFIQDNSKIYIFGKDGTKVMSEELGIKLLGRIPLDPKICYASDCGNPLMLSED--LAGIYEDFAKDIRSFI |
| 3Q9L Chain:A ((2-249)) | ----------------------------------------------------------------------------------------------ARIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFAIGLRNLDLIMGCERRVVYDFVNVIQGDATLNQALIKDKRTENLYILPASQTRDKD-------ALTREGVAKVLDDLKAMDFEFIVCDSPAGIETGALMALYF--ADEAIITTNPEVSSVRDSDRILGILASKSRRAENGEEPIKEHLLLTRYNPGRVSRGD-M---LSMEDVLEILRIKLVGVIPEDQSVLRASNQGEPVILDINADAGKAYADTVERLLGEE |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3Q9L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -132971 for 1974 contacts (-67.4/contact) +
2D Compatibility (PS) -24064 + (NN) -10354 + (LL) 8096
1D Compatibility (HY) -4000 + (ID) 2850
Total energy: -166143.0 ( -84.17 by residue)
QMean score : 0.414
|
|
|