Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKILVIQGPNLNMLGHRDPRLYGMVTLDQIHEIMQTFVKQGNLDVELEFFQTNFEGEIIDKIQESVGSDYEGIIINPGAFSHTSIAIADAIMLAGKPVIEVHLTNIQAREEFRKNSYTGAACGGVIMGFGPLGYNMALMAMVNILAEMKAFQEAQKNNPNNPNNPINNQK
2C4W Chain:A ((10-168))
MKILVIQGPNLNMLGHRDPRLYGMVTLDQIHEIMQTFVKQGNLDVELEFFQTNFEGEIIDKIQESVGSEYEGIIINPGAFSHTSIAIADAIMLAGKPVIEVHLTNIQAREEFRKNSYTGAACGGVIMGFGPLGYNMALMAMVNILAEMKAFQEAQKNNP-----------
General information:
TITO was launched using:
RESULT:
Template:
2C4W.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -115672 for 1231 contacts (-94.0/contact) +
2D Compatibility (PS) -17692 + (NN) -7657 + (LL) -372
1D Compatibility (HY) -24400 + (ID) 7900
Total energy: -173693.0 ( -141.10 by residue)
QMean score : 0.510
(partial model without unconserved sides chains):
PDB file :
Tito_2C4W.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2C4W-query.scw
PDB file :
Tito_Scwrl_2C4W.pdb
: