Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLNEQQITRLLYRLQDPVLEASLEETEGVLEVQVLEETANIKIALADPAVETDHFVHNIEELLTQFGVNEINIELEYLPAAVIDRIFQARDNILSEASETKFLAIASGKGGVGKSTVSANLAIALAQQGKKVGLLDADIYGFSIPVLLGTTESPH-K----------ENGQII-PVETHGIQMISMDFFVEQGEPVIWRGPMLGKMIKMFLEEVRWGKLDYLLIDLPPGTGDVALDIHTLIPKCNELIVTTPHYAAASVASRAGYMAAKNN--------HKIIGVIENMSYLTLADGQVLKVFGQGGGEKVAADLETQLLIQLPIEQPEPNG--NGYVSALFNSSSTSGKAYKTLAEKIIPYLS |
| 3Q9L Chain:A ((2-250)) | ---------------------------------------------------------------------------------------------------ARIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFAIGLRNLDLIMGCERRVVYDFVNVIQGDATLNQALIKDKRTENLYILPASQTRD-KD------ALTREGVAKVLDDLKAMDFEFIVCDSPAGIETGALMALY--FADEAIITTNPEVSSVRDSDRILGILASKSRRAENGEEPIKEHLLLTRYNPGRVS---RGDM--LSMEDVLEILRIKLVGVIPEDQSVLRASNQGEPVILD-INADAGKAYADTVERLLGEE- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3Q9L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -101458 for 1989 contacts (-51.0/contact) +
2D Compatibility (PS) -24028 + (NN) -3062 + (LL) 10228
1D Compatibility (HY) -3200 + (ID) 2400
Total energy: -123920.0 ( -62.30 by residue)
QMean score : 0.444
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