Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceAMCRVCGDKASGFHYGVHACEGCKGFFRRTIRMKLEYERCERACKVQKKSRNKCQYCRFQKCLALGMSHDAIRYGRMPEAEKKKLVAGLLAGENPQSSSGTDLKTLAKHVNTAYLRNLNMTKKRARSILTGKTSCTAPFVIHDMDSLWQAENGLVWNQLNGAPLNKEIGVHVFYRCQCTTVETVRELTEFAKNIPGFVDLFLNDQVTLLKYGVHEAIFAMLPSLMNKDGLLVANGKGFVTREFLRSLRKPFSEIMEPKFEFAVKFNALELDDSDLALFVAAIILCGDRPGLMNVKQVEQIQDGILQALDQHLQVHHPDSSHLFPKLLQKMADLRQLVTENAQLVQMIKKTESETSLHPLLQEIYRDLY
3S9S Chain:A ((15-283))------------------------------------------------------------------------------------------------SA---DLRALAKHLYDSYIKSFPLTKAKARAILTGK----SPFVIYDMNSLMMGEDKIKFKHIT-----KEVAIRIFQGCQFRSVEAVQEITEYAKSIPGFVNLDLNDQVTLLKYGVHEIIYTMLASLMNKDGVLISEGQGFMTREFLKSLRKPFGDFMEPKFEFAVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQALELQLKLNHPESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKKTET-MSLHPLLQEIYKDL-


General information:
TITO was launched using:
RESULT:

Template: 3S9S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -170540 for 1989 contacts (-85.7/contact) +
2D Compatibility (PS) -28067 + (NN) -18422 + (LL) 6740
1D Compatibility (HY) -36800 + (ID) 8400
Total energy: -255489.0 ( -128.45 by residue)
QMean score : 0.618

(partial model without unconserved sides chains):
PDB file : Tito_3S9S.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3S9S-query.scw
PDB file : Tito_Scwrl_3S9S.pdb: