Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTERKKLVLVDGNSLAYRAFFALPLLSNDKGVHTNAVYGFAMILMKMLEDEKPTHMLVAFDAGKTTFRHGTFKEYKGGRQKTPPELSEQMPFIRELLDAYQISRYELEQYEADDIIGTLAKSAEKDGFEVKVFSGDKDLTQLATDKTTVAITRKGITDVEFYTPEHVKEKYGLTPEQIIDMKGLMGDSSDNIPGVPGVGEKTAIKLLKQFDSVEKLLESIDEVSGKKLKEKLEEFKDQALMSKELATIMTDAPIEVSVSGLEYQGFNREQVIAIFKDLGFNTLLERLGEDSAEAEQDQSLEDINVKTVTDVTSDILVSPSAFVVEQIGDNYHEEPILGFSIVNETGAYFIPKDIAVESEVFKEWVENDEQKKWVFDSKRAVVALRWQGIELKGAEFDTLLAAYIINPGNSYDDVASVAKDYGLHIVSSD-ESVYGKGAKRAVPSEDVLSEHLGRKALAIQSLREKLVQELENNDQLELFEELEMPLALILGEMESTGVKVDVDRLKRMGEELGAKLKEYEEKIHEIAGEPFNINSPKQLGVILFEKIGLPVVKKTKTGYSTSADVLEKLADKHDIVDYILQYRQIGKLQSTYIEGLLKVTRPDSHKVHTRFNQALTQTGRLSSTDPNLQNI---PIRLEEGRKIRQ----AFVPSEKDWLIFAADYSQIELRVLAHISKDENLIEAFTNDMDIHTKTAMDVFHVAKDEVTSAMRRQAKAVNFGIVYGISDYGLSQNLGITRKEAGAFIDRYLESFQGVKAYMEDSVQEAKQKGYVTTLMHRRRYIPELTSRNFNIRSFAERTAMNTPIQGSAADIIKKAMIDMAAKLKEKQ-LKARLLLQVHDELIFEAPKEEIEILEKLVPEVMEHA-------LALDVPLKVDFASGPSWYDAK---
4XVK Chain:A ((1-666))---KKHFCDIRHLD-----------------------DWAKSQLIEMLKQAAALVITVMYTDGST---------------------------------------------------------------------------QLGADQTPVSSVRGIVVLVKRQACGPVLEGF--------------------------VSDDPCIYIQIEHSAIWD-----------QEQEAHQQFARNVLF----QTMKCKCP-----------------VICFNAKDFVRIVLQFFGNDG---------------------------SWKHVADFIG-------------------------------------------------------------------LDPRIAAWLIDPSDATPSFEDLVEKYCEKSITVKVNSTYGN------SSRNIVNQNVRENLKTLYRLTMDLCSKLKDYGLWQLFRTLELPLIPILAVMESHAIQVNKEEMEKTSALLGARLKELEQEAHFVAGERFLITSNNQLREILFGKLKLHLLSYP----STSEAVLNALRDLHPLPKIILEYRQVHKIKSTFVDGLLACMKKG--SISSTWNQTGTVTGRLSAKHPNIQGISKHPIQITTPKKILTISPRAMFVSSKGHTFLAADFSQIELRILTHLSGDPELLKLD----DVFSTLTSQWKDVPVEQVTHADREQTKKVVYAVVYGAGKERLAACLGVPIQEAAQFLESFLQKYKKIKDFARAAIAQCHQTGCVVSIMGRRRPLPRIHAHDQQLRAQAERQAVNFVVQGSAADLCKLAMIHVFTAVAASHTLTARLVAQIHDELLFEVEDPQIPECAALVRRTMESLEQVQALELQLQVPLKVSLSAGRSWGHLVPLQ


General information:
TITO was launched using:
RESULT:

Template: 4XVK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2915 -40744 -13.98 -66.68
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.71

3D Compatibility (PKB) : -13.98
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.487

(partial model without unconserved sides chains):
PDB file : Tito_4XVK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4XVK-query.scw
PDB file : Tito_Scwrl_4XVK.pdb: