Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDRVAGQVNSRRGELLELAAAMFAERGLRATTVRDIADGAGILSGSLYHHFASKEEMVDELLRGFLDWLFARYRDIVDSTANPLERLQGLFMASFEAIEHHHAQVVIYQDEAQRLASQPRFSYIEDRNKQQRKMWVDVLNQGIEEGYFRPDLDVDLVYRFIRDTTWVSVRWYRPGGPLTAQQVGQQYLAIVLGGITKEGV
3HIM Chain:A ((14-201))
-------TSKAAARIRAAAIEVFAAKGYGATTTREIAASLDMSPGAVYPHYKTKESLLYAISLEGHHSVLAAITAADFPDIAAPDRLMSTVTAYVTWHADNRASARVGQYELRSLSP-EHFAIIADIRRSTTKVFTRIIEAGATAGDFHP-FDIEAAALAITSLGIDVSRWFPSHTYSDPRIIAARYVELALRMVGC---
General information:
TITO was launched using:
RESULT:
Template:
3HIM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -124292 for 1468 contacts (-84.7/contact) +
2D Compatibility (PS) -20069 + (NN) -8855 + (LL) 684
1D Compatibility (HY) -4400 + (ID) 1850
Total energy: -158782.0 ( -108.16 by residue)
QMean score : 0.451
(partial model without unconserved sides chains):
PDB file :
Tito_3HIM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HIM-query.scw
PDB file :
Tito_Scwrl_3HIM.pdb
: