Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTDNHIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRERAINGADLLKPAG-IRVVEAAGLLAEVTRRGGRVRHELEV-YHDG-ELLR-YFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLN--DGR--VLRPRVVVGADGIASYVRRRLLDIDVERRPYPSPMLVGTFAL---APCVAERNRL-YVDSQGGLAYFYPIGFDRARLVVSFPREEARELMADTRGESLRRRLQRFVGDESAEAIAAV--TG----TSRFKGIPIGYLNLDRYWADNVAMLGDAIHNVHPITGQGMNLAIEDASALADALDLALRDACALEDALAGYQAERFPVNQAIVSYGHALATSLEDRQRFAGVFDTALQGSSRTPEALGGERSYQPVRSPAPLG |
| 3E1T Chain:A ((5-422)) | --PEVFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFPRH-QIGESLLPATVHGICAMLGLTDEMKRAGFPIKRGGTFRWGKEPEPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSER-KGVDVRERHEVIDVLFEG-ERAVGVRYRNTEGVELMAHARFIVDASGNRTRVSQ-AVGERVYSRFFQNVALYGYFENGKRLPAPRQGNILSAAFQD-GWFWYIPLSDTLTSVGAVVSREAAEAIKDGHE-AALLRYIDR-CPI-IKEYLAPATRVTTGDYGEI-RIRKDYSYCNTSFWKNGMALVGDAACFVDPVFSSGVHLATYSALLVARAINTCLAGEMSEQRCFEEFERRYRREYGNFYQ------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3E1T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -217559 for 2901 contacts (-75.0/contact) +
2D Compatibility (PS) -35396 + (NN) -1128 + (LL) 2856
1D Compatibility (HY) -12400 + (ID) 3400
Total energy: -267027.0 ( -92.05 by residue)
QMean score : 0.417
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