Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHSLQAKILDPRLGSDFPLPQYATPGSAGLDLRAMLKEDSVLGPGQTLLIPTGLSIYIADPGLAALVLPRSGLGHKHGIVLGNLVGLIDSDYQGELMVSCWNRGESPFTIAVGERIAQLVLVPVVQ-AHFELVEAFDESQRGAGGFGHSGSH
3F4F Chain:A ((35-163))
-------------SASATVPTKGSATAAGYDIYAS--QDITIPAMGQGMVSTDISFTVPV-GTYGRIAPRSGLAVKNGIQT--GAGVVDRDYTGEVKVVLFNHSQRDFAIKKGDRVAQLILEKIVDDAQIVVVDSLEESARGAGGFG-----
General information:
TITO was launched using:
RESULT:
Template:
3F4F.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -86605 for 811 contacts (-106.8/contact) +
2D Compatibility (PS) -13924 + (NN) -6825 + (LL) 876
1D Compatibility (HY) -6400 + (ID) 2250
Total energy: -115128.0 ( -141.96 by residue)
QMean score : 0.390
(partial model without unconserved sides chains):
PDB file :
Tito_3F4F.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3F4F-query.scw
PDB file :
Tito_Scwrl_3F4F.pdb
: