Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNATYRHITVLLEEAVSALAPREDGCYLDGTFGRGGHSRALLEKLGAGGRLLGFDKDPQAIQTGKALAAEDGRFVIVQRSFAELGDEVRARGLEGRVDGVLLDLGVSSPQLDDPERGFSFLNDGPLDMRMNPGQGISAAEFIANATEEEIARVFKEYGEERFAKRMARAIVQRRQERPFERTADLAEVITVANPAWEKGKNPATRAFQGLRIHVNNELGDLERGLDAALESLAVGGRLVVISFHSLEDRIVKLFMRKHAKGEADNLPRDLPIRSKVFEPRLKLLGKPQYASEEELKANPRSRSAVMRVAEKLR |
| 3G5L Chain:A ((25-246)) | ---EGLKAAGEWHELKKMLPDFNQKTVLDLGCGFGWHCIYAAEH-GAK-KVLGIDLSERMLTEAKRKT-TSPVVCYEQKAIEDIAIEPDA-----------YNVVLSSLALHYIAS--------------------------FDDICKKVYINLKSSGSFIFSVEHPVFTADGRQD-------------------WYTDETGNKLHWPVDRYFNESMRTSHFLG-------------EDVQKYHRTVTTYIQTLLKNG------------FQINSVIEPEPA----PELKDLPEMQDEYRRPMMLLISATKQE |
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General information:
TITO was launched using:
| RESULT:
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Template: 3G5L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 8733 for 1725 contacts (5.1/contact) +
2D Compatibility (PS) -23172 + (NN) -7815 + (LL) 4780
1D Compatibility (HY) -2800 + (ID) 1900
Total energy: -22174.0 ( -12.85 by residue)
QMean score : 0.333
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