Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKILIVNSIYYTEIANLLLEGATDKLKGSNASYNVIEV---PGAFEIPAAILFAVKSKHFNYDGYLALGCVIRGETDHYQYICKGVIKGLNEVVMHNTVPLGMGVITADSKDKALVRADKDKKNIGGRTASAVLHMIDLYNKLR
1ZIS Chain:I ((14-149))
--KIGIVVGRFNDFITSKLLSGAEDALLRHGVDTNDIDVAWVPGAFEIPFAAKKMAETKK--YDAIITLGTVIRGATTHYDYVCNEAAKGIAQAANTTGVPVIFGIVTTENIEQAIERAGTKAGNKGVDCAVSAIEMANLNRSFE
General information:
TITO was launched using:
RESULT:
Template:
1ZIS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -117164 for 1141 contacts (-102.7/contact) +
2D Compatibility (PS) -14525 + (NN) -9440 + (LL) 232
1D Compatibility (HY) -4800 + (ID) 2500
Total energy: -148197.0 ( -129.88 by residue)
QMean score : 0.483
(partial model without unconserved sides chains):
PDB file :
Tito_1ZIS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZIS-query.scw
PDB file :
Tito_Scwrl_1ZIS.pdb
: