Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKILVIQGPNLNMLGHRDPRLYGMVTLDQIHEIMQTFVKQGNLDVELEFFQTNFEGEIIDKIQESVGSDYEGIIINPGAFSHTSIAIADAIMLAGKPVIEVHLTNIQAREEFRKNSYTGAACGGVIMGFGPLGYNMALMAMVNILAEMKAFQEAQKNNPNNPNNPINNQK
3LWZ Chain:A ((8-152))
FHILLLNGPNLNLLGTREPEKYGYTTLAEIVSQLEIQAQ--GMDVALSHLQSNAEHALIDSIHQAR-GNTDFILINPAAFTHTSVALRDALLGVQIPFIEIHLSNVHAREPFRHHSYLSDIAVGVICGLGADGYNFALQAAVNRLSKS----------------------
General information:
TITO was launched using:
RESULT:
Template:
3LWZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -112769 for 1121 contacts (-100.6/contact) +
2D Compatibility (PS) -15913 + (NN) -4431 + (LL) -4
1D Compatibility (HY) -11200 + (ID) 3200
Total energy: -147517.0 ( -131.59 by residue)
QMean score : 0.532
(partial model without unconserved sides chains):
PDB file :
Tito_3LWZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3LWZ-query.scw
PDB file :
Tito_Scwrl_3LWZ.pdb
: