Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTAVAAGALVVETDSFRLRLLDGLVASIGERGYRATTVSDIVRHARTSKRTFYDRFTSKEQCFLELLLADNETLGNSIRAAVDPNADWHDQIRQAVEAYVTHIESRPAVTLSWIREFPSLGA--AAYPVQRRGMEQLTSLLIELSASPGFRRANLPPLNVPLAVILLGGLRELTALTVEDG---QPIRNIVEPAVDASIALLGPRS
2F07 Chain:A ((4-195))
--------MPKQTSGKYEKILQAAIEVISEKGLDKASISDIVKKAGTAQGTFYLYFSSKNALIPAIAENLLTHTLDQIKGRLHGDEDFWTVLDILIDETFLITERHKDIIVLCYSGLAIDHSMEKWETIYQPYYSWLEKIINKAIANHEVTE-GIN--SKWTARTIINLVENTAERFYIGFEQDENVEVYKKEIFTFLKRSLG---
General information:
TITO was launched using:
RESULT:
Template:
2F07.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -94683 for 1332 contacts (-71.1/contact) +
2D Compatibility (PS) -19834 + (NN) -6534 + (LL) 968
1D Compatibility (HY) -6800 + (ID) 1250
Total energy: -128133.0 ( -96.20 by residue)
QMean score : 0.501
(partial model without unconserved sides chains):
PDB file :
Tito_2F07.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2F07-query.scw
PDB file :
Tito_Scwrl_2F07.pdb
: