Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDRVAGQVNSRRGELLELAAAMFAERGLRATTVRDIADGAGILSGSLYHHFASKEEMVDELLRGFLDWLFARYRDIVDSTANPLERLQGLFMASFEAIEHHHAQVVIYQDEAQRLASQPRFSYIEDRNKQQRKMWVDVLNQGIEEGYFRPDLDVDLVYRFIRDTTWVSVRWY-RPG-GPLTAQQVGQQYLAIVLGGITKEGV
2F07 Chain:A ((4-195))
---MPKQTSGKYEKILQAAIEVISEKGLDKASISDIVKKAGTAQGTFYLYFSSKNALIPAIAENLLTHTLDQIKGRLHGDEDFWTVLDILIDETFLITERHKDIIVLCYSGLAI-DH--SMEKWETIYQPYYSWLEKIINKAIANHEVTEGINSKWTARTIINLVENTAERFYIGFEQDENVEVYKKEIFTFLKRSLG----
General information:
TITO was launched using:
RESULT:
Template:
2F07.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -103836 for 1345 contacts (-77.2/contact) +
2D Compatibility (PS) -20536 + (NN) -10062 + (LL) 576
1D Compatibility (HY) -9200 + (ID) 1350
Total energy: -144408.0 ( -107.37 by residue)
QMean score : 0.460
(partial model without unconserved sides chains):
PDB file :
Tito_2F07.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2F07-query.scw
PDB file :
Tito_Scwrl_2F07.pdb
: