Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRSQKVILTNMCLIEDNKGRIVMQIRDPKRYSWSG-AALPGGHIEEGESLYDALVREVHEETGLTISNPKLVGMKHWYTDEGIRYLVFLYKTYDFSGELQSSDEGDVVWIERSQLDKIELAYDMLNLLRVFDEDDISEMFYSKRLEDGFIRKFY
3GWY Chain:A ((2-129))
-----KSIEVVAAVIRL-GEKYLCVQR--------FRYEFPGGKVEEGESLQEALQREIMEEMDYVIEVGEKLLTVHHTYPD-FEITMHAFLCHPVGQRYVLKEHIAAQWLSTREMAILDWAEADKPIVRKISE---------------------
General information:
TITO was launched using:
RESULT:
Template:
3GWY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -80862 for 841 contacts (-96.1/contact) +
2D Compatibility (PS) -12696 + (NN) -4242 + (LL) 1712
1D Compatibility (HY) -2800 + (ID) 1250
Total energy: -100138.0 ( -119.07 by residue)
QMean score : 0.461
(partial model without unconserved sides chains):
PDB file :
Tito_3GWY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3GWY-query.scw
PDB file :
Tito_Scwrl_3GWY.pdb
: