Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLHQFSRNELAIGKEGLETLKNSTVAVLGVGGVGSFAAEALARSGVGRILLVDKDDVDITNVNRQLHALLSTVGQPKVDLMKARIADINPECEVIALKMFYTE-ETYEQFFDYGLDYVIDASDTICYKIHLMKECLKRDIPLISSMGAANKTDPTRFQIADISKTHTDPIAKVVRTKLRKEGIKKGVQVIFSDESPIVIREDVRKEVGNDEAKIRKAKMPPSSNAFVPSVAGLIMGGHVVMDLLKDIEIKRVKDK
1Y8Q Chain:B ((6-198))----------GLPRELAEAVAGGRVLVVGAGGIGCELLKNLVLTGFSHIDLIDLDTIDVSNLNRQFLFQKKHVGRSKAQVAKESVLQFYPKANIVAYHDSIMNPDYNVEFFR-QFILVMNALDNRAARNHVNRMCLAADVPLIESGTAGYLGQ---VTT-IKKGVTECYECHP----------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1Y8Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 750 -67363 -89.82 -429.06
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain B : 0.66

3D Compatibility (PKB) : -89.82
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.535

(partial model without unconserved sides chains):
PDB file : Tito_1Y8Q.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1Y8Q-query.scw
PDB file : Tito_Scwrl_1Y8Q.pdb: