Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFSNLYRGLLKTSSRFSDGVKSIFSAKK-KLDQSLLDELEELLISMDIGHKTSKLIIDRLASIKFDKEVE-HNIITQQLMSEIEAILNPVVQ--PLILDK-NPHIIMVCGVNGNGKTTTIGKLAYKYKNMGKSVMLVACDTFRAAASEQLNIWAERSDCFIVTGEYGNDSASVAYRAVSQAIKGSVDVVLIDTAGRLQNNVNLMEELSKIYRTIKKLDGTAPHDVILVLDATTGQNAYSQLEAFSKMVSVTGLIITKLDGTAKGGVVIGLAETYRVKLHAIGIGESIEDLREFTSKEFAKALFGCD |
| 3B9Q Chain:A ((1-302)) | --EKVFSGFSKTRENLAV-IDELLLFWNLAETDRVLDELEEALLVSDFGPKITVRIVERLREDIMSGKLKSGSEIKDALKESVLEMLAK--SKTELQLGFRKPAVIMIVGVNGGGKTTSLGKLAHRLKNEGTKVLMAAGDTFRAAASDQLEIWAERTGCEIVVAE-KAKAATVLSKAVKRGKEEGYDVVLCDTSGRLHTNYSLMEELIACKKAVGKIVSGAPNEILLVLDGNTGLNMLPQAREFNEVVGITGLILTKLDGSARGGCVVSVVEELGIPVKFIGVGEAVEDLQPFDPEAFVNAIFS-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3B9Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -242728 for 2556 contacts (-95.0/contact) +
2D Compatibility (PS) -32274 + (NN) -14773 + (LL) 624
1D Compatibility (HY) -28000 + (ID) 5850
Total energy: -323001.0 ( -126.37 by residue)
QMean score : 0.591
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