Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNFKYLFVLMLAVIVFAAACGNSSSLDNQKNASNDSDSKSGGYKPKELTVQFVPSQNAGTLEAKAKPLEKLLSKELGIPVKVSVSTNYNTIVEAMKSKKVDVGFLPPTAYTLAHDQKAADLLLQAQRFGVKEDGSASKELVDSYKSEILVKKDSKIKSL--KDLKGKKIALQDVTSTAGYTFPLAMLKNEAGINATKDMKIVNVKGHDQAVISLLNGDVDAAAV----FNDARNTVKKDQPNVFKDTRILKLTQAIPNDTISVRPDMDKDFQEKLKKAFIDIAKSKEGHKIISEVYSHEGYTETKDSNFDIVREYEKLVKDMK |
| 1HSL Chain:A ((1-238)) | AIPQKIRIGT------------------------------DPTYAP------FESKNAQGELVGFDIDLAKELCKRINTQCTFVE-NPLDALIPSLKAKKID--AIMSSLSITEKRQQEIAF---------------TDKLYAADSRLVVAKNS-DIQP-TVASLKGKRVGVLQGTTQETFGNEHW---------APKGIEIVSYQGQDNIYSDLTAGRIDAAFQDEVAASEGFLKQPVGKDYKFGGPAVKDEKLFGVGTGMGLRKE-DNELREALNKAFAEMRADGTYEKLAKKYFDFDVYGG-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1HSL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -28513 for 1873 contacts (-15.2/contact) +
2D Compatibility (PS) -25033 + (NN) -8750 + (LL) 5540
1D Compatibility (HY) -6800 + (ID) 2200
Total energy: -65756.0 ( -35.11 by residue)
QMean score : 0.403
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