Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTAVAAGALVVETDSFRLRLLDGLVASIGERGYRATTVSDIVRHARTSKRTFYDRFTSKEQCFLELLLADNETLGNSIRAAVDP-NADWHDQIRQAVEAYVTHIESRPAVTLSWIREFP--SLGAAAYPVQRRGMEQLTSLLIELSASPGFRRANLPPLNVPLAVILLGGLRELTALTVE---DGQPIRNIVEPAVDASIALLGPRS
3ON2 Chain:A ((7-197))
---------PYHHGSLRRVLLARAESTLEKDGVDGLSLRQLAREAG-----PSKHFRDRQALLDALAESGFLRLTAALERAVEEAESHARARFAALAGAYVSFALAHRELLALMYGNKHAPGAASQVVEAGHASMDLTVRIVTEAQAAGDIGP----GDASRIALVAFATFHGIATLAAGGMLDGAPVDEVVTAASDTFWRGLA---
General information:
TITO was launched using:
RESULT:
Template:
3ON2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -96990 for 1269 contacts (-76.4/contact) +
2D Compatibility (PS) -19318 + (NN) -4920 + (LL) 1304
1D Compatibility (HY) -4800 + (ID) 1350
Total energy: -126074.0 ( -99.35 by residue)
QMean score : 0.583
(partial model without unconserved sides chains):
PDB file :
Tito_3ON2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ON2-query.scw
PDB file :
Tito_Scwrl_3ON2.pdb
: