Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHSLQAKILDPRLGSDFPLPQYATPGSAGLDLRAMLKEDSVLGPGQTLLIPTGLSIYIADPGLAALVLPRSGLGHKHGIVLGNLVGLIDSDYQGELMVSCWNRGESPFTIAVGERIAQLVLVPVVQAHFELVEAFDESQRGAGGFGHSGSH
3CA9 Chain:A ((18-141))
-SSLLVKKLV----ESATTPMRGSEGAAGYDISSV--EDVVVPAMGRIAVSTGISIRVPD-GTYGRIAPRSGLAYKYGIDV--LAGVIDEDYTGEVKVILYNTTERDYIIKKGDRIAQLILEQIVTPGVAVVLD-----------------
General information:
TITO was launched using:
RESULT:
Template:
3CA9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -102562 for 858 contacts (-119.5/contact) +
2D Compatibility (PS) -13649 + (NN) -5416 + (LL) -180
1D Compatibility (HY) -8400 + (ID) 2350
Total energy: -132557.0 ( -154.50 by residue)
QMean score : 0.374
(partial model without unconserved sides chains):
PDB file :
Tito_3CA9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3CA9-query.scw
PDB file :
Tito_Scwrl_3CA9.pdb
: