Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNFKYLFVLMLAVIVFAAACGNSSSLDNQKNASNDSDSKSGGYKPKELTVQFVPSQNAGTLEAKAK-PLEKLLSKELGIPVKVSV---STNYNTIVEAMKSKKVDVGFLPPTAYTLAHDQKAADLLLQAQRFGVKEDGSASKELVDSYKSEILVKKDSKIKSLKDLKGKKIALQDVTSTAGYTFPLAMLKNEAGINATKDMKIVNVKGHDQAVISLLNGDVDAAAVFNDARNTVKKDQPNVFKDTRILKLTQ------AIPNDTISVRPDMDKDFQEKLKKAFIDIAKSKEGHKIISEVYSHEGYTETKDSNFD-----------------IVREYEKLVKDMK----------------------------------------- |
| 3UIF Chain:A ((2-331)) | VEDLKVVRIASVATNV-------------------------GG-----------KTVYAGSASLVVNGAFPEELRKQ-GIKVEWVPAAMASVGPVINEGFASGKIDFGIYGDLPPIILNASKPTVQLVAPWG--------------TTSNSYLVVPKNSTAKSIKDLKGKKIALHR-GRPWELAFSNLLQSEG---LTFKDFKIVNVN-PQVGAAALASGTVDGFFSLFDSYILEDRGVGKIIWSTKTAPVDWKLMGGVWARNDFVKQNPEITQAIVTAYLKSVHWVAQDENKETYIREYSNKIYPESVNRREYDQDNVSWRQRWSPLYDVALQEHYRKAVAYAQASGLTRTQADVQQMLNPHFVATALKELKLEGFWTPNAENLY |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UIF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -17563 for 2050 contacts (-8.6/contact) +
2D Compatibility (PS) -28281 + (NN) -5985 + (LL) 2388
1D Compatibility (HY) -9200 + (ID) 3050
Total energy: -61691.0 ( -30.09 by residue)
QMean score : 0.315
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