Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTAVAAGALVVETDSFRLRLLDGLVASIGERGYRATTVSDIVRHARTSKRTFYDRFTSKEQCFLELLLADNETLGNSIRAAVDPNADWHDQIRQAVEAYVTHIESRPAVTLSWIREFPSLGAAAYPVQRRGMEQLTSLLIELSASPGFRRANLPPLNVPLAVILLGGLRELTALTVEDGQPIRNIVEPAVDASIALLGPRS
3HIM Chain:A ((14-112))
------------TSKAAARIRAAAIEVFAAKGYGATTTREIAASLDMSPGAVYPHYKTKESLLYAISLEGHHSVLAAITAADFPDIAAPDRLMSTVTAYVTWHADNRASAR------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3HIM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31529 for 620 contacts (-50.9/contact) +
2D Compatibility (PS) -10430 + (NN) -4268 + (LL) 7584
1D Compatibility (HY) -2800 + (ID) 1200
Total energy: -42643.0 ( -68.78 by residue)
QMean score : 0.446
(partial model without unconserved sides chains):
PDB file :
Tito_3HIM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HIM-query.scw
PDB file :
Tito_Scwrl_3HIM.pdb
: